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    • Pegasus Environment
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    • Pegasus Software
      • Software Modules
      • Application Development
      • Parallel Computing
      • Installing Software on a Cluster
      • Allinea
      • Amazon Web Services CLI
      • MATLAB
      • Perl
      • Python
      • Python Virtual Environments
      • R
      • RStudio
      • SAS
      • Using R through Anaconda
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Pegasus SoftwareΒΆ

  • Software Modules
  • Application Development
    • Compiling Serial Code
    • Configuring MPI on Pegasus
    • Compiling Parallel Programs with MPI
  • Parallel Computing
    • C++ program and compilation:
  • Installing Software on a Cluster
    • Downloading and extracting files
    • Configuring installation and compiling software
    • Updating PATH
    • Persistent PATH
  • Allinea
  • Amazon Web Services CLI
    • Getting Started
    • Using AWS s3 buckets from the cli
    • AWS s3 Include and Exclude filters
  • MATLAB
    • Interactive Mode
    • Batch Processing
    • Parallel Computations
    • Note on Matlab cluster configurations
  • Perl
    • Configuring a Local Library
  • Python
    • Loading and Switching Python Modules
    • Installing Python Modules with Package Managers
    • Installing Downloaded Python Modules
  • Python Virtual Environments
    • Creating Virtual Environments
    • Activating Virtual Environments
    • Comparing two Python Virtual Environments
    • Python virtual environment wrapper
  • R
    • Batch R
    • Interactive R
    • R packages
  • RStudio
    • Forwarding X11
    • Loading the Module
    • First Time configurations
    • Launching RStudio jobs through LSF
  • SAS
    • Non-Interactive Batch Mode
  • Using R through Anaconda
    • Anaconda Installation
    • Configuring Anaconda environment
    • Common R package dependencies
    • Activating conda environment upon login
    • Running jobs
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